Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 LAGE3P1-201ENST00000425356 484 ntBASIC19.94■□□□□ 0.78
PRPF3O43395 KRT18P67-201ENST00000432816 1264 ntBASIC19.94■□□□□ 0.78
PRPF3O43395 RPS2P1-201ENST00000434010 821 ntBASIC19.94■□□□□ 0.78
PRPF3O43395 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.94■□□□□ 0.78
PRPF3O43395 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.94■□□□□ 0.78
PRPF3O43395 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.94■□□□□ 0.78
PRPF3O43395 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PRPF3O43395 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.94■□□□□ 0.78
PRPF3O43395 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.94■□□□□ 0.78
PRPF3O43395 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.94■□□□□ 0.78
PRPF3O43395 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRPF3O43395 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
PRPF3O43395 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PRPF3O43395 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PRPF3O43395 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
PRPF3O43395 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
PRPF3O43395 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.93■□□□□ 0.78
PRPF3O43395 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.93■□□□□ 0.78
PRPF3O43395 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.93■□□□□ 0.78
PRPF3O43395 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PRPF3O43395 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 OR7E14P-202ENST00000530490 1290 ntBASIC19.93■□□□□ 0.78
PRPF3O43395 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
PRPF3O43395 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.93■□□□□ 0.78
PRPF3O43395 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.93■□□□□ 0.78
PRPF3O43395 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.93■□□□□ 0.78
PRPF3O43395 AC148477.8-201ENST00000624298 468 ntBASIC19.93■□□□□ 0.78
PRPF3O43395 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PRPF3O43395 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PRPF3O43395 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRPF3O43395 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRPF3O43395 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.92■□□□□ 0.78
PRPF3O43395 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.92■□□□□ 0.78
PRPF3O43395 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.92■□□□□ 0.78
PRPF3O43395 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.92■□□□□ 0.78
PRPF3O43395 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.92■□□□□ 0.78
PRPF3O43395 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.92■□□□□ 0.78
PRPF3O43395 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.92■□□□□ 0.78
PRPF3O43395 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.92■□□□□ 0.78
PRPF3O43395 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.92■□□□□ 0.78
PRPF3O43395 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.92■□□□□ 0.78
PRPF3O43395 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
PRPF3O43395 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.92■□□□□ 0.78
PRPF3O43395 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.92■□□□□ 0.78
PRPF3O43395 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PRPF3O43395 GPR89P-201ENST00000407924 1495 ntBASIC19.92■□□□□ 0.78
PRPF3O43395 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRPF3O43395 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PRPF3O43395 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.91■□□□□ 0.78
PRPF3O43395 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PRPF3O43395 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRPF3O43395 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPF3O43395 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRPF3O43395 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.91■□□□□ 0.78
PRPF3O43395 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.91■□□□□ 0.78
PRPF3O43395 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.91■□□□□ 0.78
PRPF3O43395 AF186996.4-201ENST00000467186 377 ntBASIC19.91■□□□□ 0.78
PRPF3O43395 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.91■□□□□ 0.78
PRPF3O43395 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.91■□□□□ 0.78
PRPF3O43395 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRPF3O43395 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.91■□□□□ 0.78
PRPF3O43395 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PRPF3O43395 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.91■□□□□ 0.78
PRPF3O43395 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.91■□□□□ 0.78
PRPF3O43395 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.91■□□□□ 0.78
PRPF3O43395 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms