Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN1O15353 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN1O15353 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN1O15353 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FOXN1O15353 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXN1O15353 MIR943-201ENST00000401286 94 ntBASIC20.68■□□□□ 0.9
FOXN1O15353 COX5BP8-201ENST00000416911 349 ntBASIC20.68■□□□□ 0.9
FOXN1O15353 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.68■□□□□ 0.9
FOXN1O15353 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.68■□□□□ 0.9
FOXN1O15353 IGHV3-65-201ENST00000523210 341 ntBASIC20.68■□□□□ 0.9
FOXN1O15353 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.68■□□□□ 0.9
FOXN1O15353 AC009154.2-201ENST00000621177 724 ntBASIC20.68■□□□□ 0.9
FOXN1O15353 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXN1O15353 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN1O15353 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN1O15353 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXN1O15353 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
FOXN1O15353 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
FOXN1O15353 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN1O15353 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
FOXN1O15353 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN1O15353 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
FOXN1O15353 SDHAP2-201ENST00000455183 2001 ntBASIC20.67■□□□□ 0.9
FOXN1O15353 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXN1O15353 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN1O15353 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXN1O15353 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN1O15353 PRYP5-201ENST00000451909 266 ntBASIC20.67■□□□□ 0.9
FOXN1O15353 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXN1O15353 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXN1O15353 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
FOXN1O15353 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
FOXN1O15353 AC073592.4-201ENST00000623827 446 ntBASIC20.67■□□□□ 0.9
FOXN1O15353 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
FOXN1O15353 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXN1O15353 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXN1O15353 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXN1O15353 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN1O15353 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXN1O15353 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
FOXN1O15353 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 AL121761.2-201ENST00000598007 1648 ntBASIC20.67■□□□□ 0.9
FOXN1O15353 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN1O15353 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXN1O15353 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXN1O15353 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
FOXN1O15353 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 AC096734.2-201ENST00000562054 433 ntBASIC20.66■□□□□ 0.9
FOXN1O15353 AC051619.7-201ENST00000568314 623 ntBASIC20.66■□□□□ 0.9
FOXN1O15353 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.66■□□□□ 0.9
FOXN1O15353 AL589182.2-201ENST00000619332 1049 ntBASIC20.66■□□□□ 0.9
FOXN1O15353 AC004706.3-202ENST00000621574 984 ntBASIC20.66■□□□□ 0.9
FOXN1O15353 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXN1O15353 AC025580.3-201ENST00000617932 1424 ntBASIC20.66■□□□□ 0.9
FOXN1O15353 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXN1O15353 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXN1O15353 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXN1O15353 PHGDH-209ENST00000641074 1780 ntBASIC20.66■□□□□ 0.9
FOXN1O15353 AC138028.4-201ENST00000564984 1845 ntBASIC20.66■□□□□ 0.9
FOXN1O15353 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXN1O15353 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXN1O15353 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 AL096828.2-201ENST00000567259 1965 ntBASIC20.66■□□□□ 0.9
FOXN1O15353 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXN1O15353 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.66■□□□□ 0.9
FOXN1O15353 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN1O15353 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FOXN1O15353 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.65■□□□□ 0.9
FOXN1O15353 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.65■□□□□ 0.9
FOXN1O15353 IGHV3-71-201ENST00000523324 359 ntBASIC20.65■□□□□ 0.9
FOXN1O15353 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN1O15353 AC008667.4-201ENST00000607370 168 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms