Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TLR4O00206 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.2■□□□□ 0.34
TLR4O00206 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TLR4O00206 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.2■□□□□ 0.34
TLR4O00206 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TLR4O00206 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TLR4O00206 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.19■□□□□ 0.34
TLR4O00206 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TLR4O00206 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TLR4O00206 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TLR4O00206 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TLR4O00206 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TLR4O00206 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TLR4O00206 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TLR4O00206 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TLR4O00206 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR4O00206 MYCLP1-201ENST00000372451 1075 ntBASIC17.19■□□□□ 0.34
TLR4O00206 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR4O00206 PTCHD3P3-201ENST00000403073 906 ntBASIC17.19■□□□□ 0.34
TLR4O00206 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.19■□□□□ 0.34
TLR4O00206 AP006288.1-201ENST00000446065 395 ntBASIC17.19■□□□□ 0.34
TLR4O00206 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.19■□□□□ 0.34
TLR4O00206 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.19■□□□□ 0.34
TLR4O00206 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TLR4O00206 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.19■□□□□ 0.34
TLR4O00206 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.19■□□□□ 0.34
TLR4O00206 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 FZD10-202ENST00000539839 3282 ntBASIC17.19■□□□□ 0.34
TLR4O00206 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TLR4O00206 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR4O00206 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.18■□□□□ 0.34
TLR4O00206 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 OR6D1P-202ENST00000641007 5290 ntBASIC17.18■□□□□ 0.34
TLR4O00206 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.18■□□□□ 0.34
TLR4O00206 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.18■□□□□ 0.34
TLR4O00206 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.18■□□□□ 0.34
TLR4O00206 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TLR4O00206 MRPL20P1-201ENST00000400819 433 ntBASIC17.18■□□□□ 0.34
TLR4O00206 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.18■□□□□ 0.34
TLR4O00206 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.18■□□□□ 0.34
TLR4O00206 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.18■□□□□ 0.34
TLR4O00206 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.18■□□□□ 0.34
TLR4O00206 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.18■□□□□ 0.34
TLR4O00206 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
TLR4O00206 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.18■□□□□ 0.34
TLR4O00206 AL353135.1-201ENST00000606729 504 ntBASIC17.18■□□□□ 0.34
TLR4O00206 AC010654.1-201ENST00000615722 808 ntBASIC17.18■□□□□ 0.34
TLR4O00206 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TLR4O00206 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TLR4O00206 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.18■□□□□ 0.34
TLR4O00206 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
TLR4O00206 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TLR4O00206 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TLR4O00206 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TLR4O00206 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.17■□□□□ 0.34
TLR4O00206 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR4O00206 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TLR4O00206 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR4O00206 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR4O00206 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.17■□□□□ 0.34
TLR4O00206 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR4O00206 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.17■□□□□ 0.34
TLR4O00206 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TLR4O00206 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR4O00206 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TLR4O00206 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR4O00206 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.17■□□□□ 0.34
TLR4O00206 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.17■□□□□ 0.34
TLR4O00206 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.17■□□□□ 0.34
TLR4O00206 AP002414.1-201ENST00000391405 1147 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms