Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.84■□□□□ 0.13
NPIPA3F8WFD2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA3F8WFD2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.83■□□□□ 0.13
NPIPA3F8WFD2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA3F8WFD2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA3F8WFD2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA3F8WFD2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NPIPA3F8WFD2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 Z83851.2-201ENST00000609564 659 ntBASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 AC027601.4-201ENST00000611259 610 ntBASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NPIPA3F8WFD2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 SPDYE21P-201ENST00000413323 827 ntBASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 MED15P5-201ENST00000423150 992 ntBASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 AC034105.1-201ENST00000563488 319 ntBASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 AC140113.2-201ENST00000604370 208 ntBASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 MIR1199-201ENST00000621445 119 ntBASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA3F8WFD2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA3F8WFD2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms