Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RCCD1A6NED2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 AC092364.2-201ENST00000596710 2692 ntBASIC18.45■□□□□ 0.54
RCCD1A6NED2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 IGHV3-52-201ENST00000519770 353 ntBASIC18.45■□□□□ 0.54
RCCD1A6NED2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
RCCD1A6NED2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RCCD1A6NED2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCCD1A6NED2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCCD1A6NED2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCCD1A6NED2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCCD1A6NED2 FRMD8P1-201ENST00000440433 1524 ntBASIC18.44■□□□□ 0.54
RCCD1A6NED2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RCCD1A6NED2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 AC113347.1-201ENST00000413321 391 ntBASIC18.44■□□□□ 0.54
RCCD1A6NED2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCCD1A6NED2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 AC005336.2-201ENST00000593183 939 ntBASIC18.44■□□□□ 0.54
RCCD1A6NED2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCCD1A6NED2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RCCD1A6NED2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.44■□□□□ 0.54
RCCD1A6NED2 PCDHA1-201ENST00000378133 2726 ntBASIC18.43■□□□□ 0.54
RCCD1A6NED2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 TSPY5P-201ENST00000426936 936 ntBASIC18.43■□□□□ 0.54
RCCD1A6NED2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 RN7SL606P-201ENST00000472779 293 ntBASIC18.43■□□□□ 0.54
RCCD1A6NED2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 STK25P1-201ENST00000585406 838 ntBASIC18.43■□□□□ 0.54
RCCD1A6NED2 AC006011.2-201ENST00000621313 1158 ntBASIC18.43■□□□□ 0.54
RCCD1A6NED2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RCCD1A6NED2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RCCD1A6NED2 AL135999.2-201ENST00000622438 1686 ntBASIC18.43■□□□□ 0.54
RCCD1A6NED2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms