Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 AD001527.2-201ENST00000622994 785 ntBASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 CYP2T1P-202ENST00000641596 2535 ntBASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV5-3A0A0A0MS03 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC104076.2-201ENST00000448912 469 ntBASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC092647.4-201ENST00000457211 535 ntBASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 STK19B-204ENST00000512515 211 ntBASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC090616.6-201ENST00000582640 721 ntBASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL391005.1-201ENST00000623953 2435 ntBASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV5-3A0A0A0MS03 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 HLA-A-202ENST00000376806 1854 ntBASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC003669.1-201ENST00000334569 611 ntBASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC246785.2-201ENST00000432512 513 ntBASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 AL645728.1-201ENST00000366221 2101 ntBASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-3A0A0A0MS03 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms