Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 MIR718-201ENST00000390190 70 ntBASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 AC092364.2-201ENST00000596710 2692 ntBASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH1Q9Y2L9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 AC124016.1-201ENST00000609552 612 ntBASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 AL023875.1-201ENST00000640777 796 ntBASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH1Q9Y2L9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 LINC02012-201ENST00000608206 1725 ntBASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 KRASP1-201ENST00000407852 552 ntBASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 AC110285.5-201ENST00000611501 352 ntBASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.54■□□□□ 0.24
LRCH1Q9Y2L9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms