Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 AC027601.4-201ENST00000611259 610 ntBASIC18.33■□□□□ 0.52
CDH9Q9ULB4 GGTLC5P-201ENST00000617623 998 ntBASIC18.33■□□□□ 0.52
CDH9Q9ULB4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 AC026471.1-201ENST00000564629 3026 ntBASIC18.33■□□□□ 0.52
CDH9Q9ULB4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 AL591424.1-201ENST00000442569 1213 ntBASIC18.32■□□□□ 0.52
CDH9Q9ULB4 AC108073.2-201ENST00000464002 357 ntBASIC18.32■□□□□ 0.52
CDH9Q9ULB4 TERC-201ENST00000602385 541 ntBASIC18.32■□□□□ 0.52
CDH9Q9ULB4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDH9Q9ULB4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 FAM197Y3-203ENST00000618346 717 ntBASIC18.31■□□□□ 0.52
CDH9Q9ULB4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH9Q9ULB4 AC067852.2-201ENST00000590513 2313 ntBASIC18.31■□□□□ 0.52
CDH9Q9ULB4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 AL133373.2-201ENST00000623187 2828 ntBASIC18.3■□□□□ 0.52
CDH9Q9ULB4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 MED15P5-201ENST00000423150 992 ntBASIC18.3■□□□□ 0.52
CDH9Q9ULB4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 PRSS29P-201ENST00000440800 595 ntBASIC18.3■□□□□ 0.52
CDH9Q9ULB4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 AC140113.2-201ENST00000604370 208 ntBASIC18.3■□□□□ 0.52
CDH9Q9ULB4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH9Q9ULB4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms