Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 AL365203.3-201ENST00000609742 2057 ntBASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 FAM45BP-202ENST00000592932 1624 ntBASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.73□□□□□ -0.05
UBQLN2Q9UHD9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 AC124016.1-201ENST00000609552 612 ntBASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
UBQLN2Q9UHD9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 NBPF21P-201ENST00000425093 1451 ntBASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBQLN2Q9UHD9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
UBQLN2Q9UHD9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.71□□□□□ -0.06
UBQLN2Q9UHD9 AC067930.6-201ENST00000623257 4947 ntBASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms