Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 IFNL4P1-201ENST00000607083 540 ntBASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 AL353593.2-201ENST00000602529 1483 ntBASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PARPBPQ9NWS1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PARPBPQ9NWS1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.58■□□□□ 0.09
PARPBPQ9NWS1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PARPBPQ9NWS1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.58■□□□□ 0.09
PARPBPQ9NWS1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PARPBPQ9NWS1 AC011270.2-201ENST00000624293 2550 ntBASIC15.58■□□□□ 0.09
PARPBPQ9NWS1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 AC133963.1-201ENST00000504166 1679 ntBASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 AC134043.2-201ENST00000624206 2238 ntBASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 TPM4P1-201ENST00000436100 807 ntBASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 SAPCD2P3-201ENST00000455031 850 ntBASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 AC106795.1-205ENST00000512851 1056 ntBASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 REXO1L6P-202ENST00000619970 1078 ntBASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 AP005117.1-201ENST00000584346 1413 ntBASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PARPBPQ9NWS1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 REXO1L11P-201ENST00000620964 1927 ntBASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 AC004870.1-201ENST00000315132 882 ntBASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 AC003669.1-201ENST00000334569 611 ntBASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 FAAHP1-202ENST00000446499 1238 ntBASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 SCARNA2-201ENST00000458748 420 ntBASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 AC019129.2-201ENST00000609837 1235 ntBASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 AP000867.4-201ENST00000641616 219 ntBASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 KRT8P10-201ENST00000450021 1447 ntBASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PARPBPQ9NWS1 PMPCAP1-201ENST00000508114 1576 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms