Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 AC097374.2-201ENST00000618617 1306 ntBASIC16.21■□□□□ 0.19
RLIMQ9NVW2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 AC008894.3-201ENST00000624324 3103 ntBASIC16.21■□□□□ 0.19
RLIMQ9NVW2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 AL845331.1-201ENST00000424978 1190 ntBASIC16.21■□□□□ 0.19
RLIMQ9NVW2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 IGHV3-41-201ENST00000613121 348 ntBASIC16.21■□□□□ 0.19
RLIMQ9NVW2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.21■□□□□ 0.19
RLIMQ9NVW2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RLIMQ9NVW2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RLIMQ9NVW2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RLIMQ9NVW2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RLIMQ9NVW2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RLIMQ9NVW2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 AC005915.1-201ENST00000624912 2018 ntBASIC16.2■□□□□ 0.18
RLIMQ9NVW2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 COX5BP2-201ENST00000392354 334 ntBASIC16.2■□□□□ 0.18
RLIMQ9NVW2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 NTF6B-201ENST00000591913 560 ntBASIC16.2■□□□□ 0.18
RLIMQ9NVW2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
RLIMQ9NVW2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.19■□□□□ 0.18
RLIMQ9NVW2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RLIMQ9NVW2 AC007967.3-201ENST00000434308 558 ntBASIC16.19■□□□□ 0.18
RLIMQ9NVW2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms