Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NRIP3Q9NQ35 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 AC106886.4-201ENST00000623557 2502 ntBASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 KRT8P26-201ENST00000534154 1276 ntBASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 AC011840.4-201ENST00000578471 627 ntBASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 CROCCP1-201ENST00000426910 5675 ntBASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NRIP3Q9NQ35 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 FAM220CP-201ENST00000395253 831 ntBASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 AC246785.2-201ENST00000432512 513 ntBASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NRIP3Q9NQ35 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms