Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 EMBP1-201ENST00000458200 901 ntBASIC14.88□□□□□ -0.03
GCM1Q9NP62 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 AP001269.4-201ENST00000609611 512 ntBASIC14.88□□□□□ -0.03
GCM1Q9NP62 AC019129.2-201ENST00000609837 1235 ntBASIC14.88□□□□□ -0.03
GCM1Q9NP62 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 AD001527.2-201ENST00000622994 785 ntBASIC14.88□□□□□ -0.03
GCM1Q9NP62 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GCM1Q9NP62 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GCM1Q9NP62 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 AC068880.1-201ENST00000507289 2297 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GCM1Q9NP62 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GCM1Q9NP62 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GCM1Q9NP62 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 AP005117.1-201ENST00000584346 1413 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 AKR1C7P-201ENST00000305623 895 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 AC004870.1-201ENST00000315132 882 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
GCM1Q9NP62 RBM17P3-201ENST00000417687 1192 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 AC005104.2-201ENST00000427818 678 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 TPM4P1-201ENST00000436100 807 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 AC002558.1-201ENST00000488906 803 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 AC106795.1-205ENST00000512851 1056 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 IGHV3-52-201ENST00000519770 353 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 AC109462.3-201ENST00000573934 613 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 LINC01451-201ENST00000623792 534 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 AP000867.4-201ENST00000641616 219 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GCM1Q9NP62 AL355312.1-201ENST00000407115 2176 ntBASIC14.87□□□□□ -0.03
GCM1Q9NP62 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.87□□□□□ -0.03
GCM1Q9NP62 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 KRT8P10-201ENST00000450021 1447 ntBASIC14.86□□□□□ -0.03
GCM1Q9NP62 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GCM1Q9NP62 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
GCM1Q9NP62 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms