Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 AC092118.2-201ENST00000613495 667 ntBASIC14.12□□□□□ -0.15
NKX6-2Q9C056 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.12□□□□□ -0.15
NKX6-2Q9C056 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-2Q9C056 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 AC091874.3-201ENST00000512672 1195 ntBASIC14.11□□□□□ -0.15
NKX6-2Q9C056 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-2Q9C056 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 PNMA6B-201ENST00000538162 1200 ntBASIC14.1□□□□□ -0.15
NKX6-2Q9C056 AC060766.5-201ENST00000590539 871 ntBASIC14.1□□□□□ -0.15
NKX6-2Q9C056 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX6-2Q9C056 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms