Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC025524.2-201ENST00000520862 536 ntTSL 4 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 MRPS27-212ENST00000522095 504 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC087521.3-202ENST00000526408 743 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC009996.1-201ENST00000558006 653 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC084757.1-201ENST00000559987 490 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC120024.1-201ENST00000562672 995 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 ASNSD1-207ENST00000607535 579 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AL139424.1-201ENST00000607572 797 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AP000435.2-201ENST00000610280 940 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 SAMMSON-214ENST00000641395 1264 ntBASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-3Q9BYR6 GABPB1-210ENST00000560825 1412 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 FRMD3-203ENST00000376434 1397 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 RAD1P1-201ENST00000231383 813 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 MTND6P1-201ENST00000417434 424 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC090957.1-201ENST00000422657 1147 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC092646.1-201ENST00000427142 901 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 RPL5P27-201ENST00000437011 881 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 CEACAMP11-201ENST00000455211 583 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC004448.1-201ENST00000458332 883 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC104763.1-201ENST00000475274 360 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC106800.2-201ENST00000514009 1103 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 DUXAP2-201ENST00000519198 589 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 NTAN1P3-201ENST00000535885 715 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC092720.1-201ENST00000562466 447 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 SNX11-206ENST00000580219 1200 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AP001180.5-201ENST00000581948 730 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AC005730.3-201ENST00000583067 366 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AL390208.1-201ENST00000605885 644 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AL118558.4-201ENST00000607122 648 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AP005264.7-201ENST00000625003 745 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 LINC01808-202ENST00000641680 1116 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 OR6C6-201ENST00000358433 1521 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 AP001350.1-201ENST00000601906 1524 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 MRRFP1-201ENST00000435941 1675 ntBASIC10.92□□□□□ -0.66
KRTAP3-3Q9BYR6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-3Q9BYR6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC10.91□□□□□ -0.66
KRTAP3-3Q9BYR6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
KRTAP3-3Q9BYR6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC10.91□□□□□ -0.66
KRTAP3-3Q9BYR6 EEF1A1P21-201ENST00000512363 1344 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms