Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.72□□□□□ -0.37
MUC4Q99102 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
MUC4Q99102 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.72□□□□□ -0.37
MUC4Q99102 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.72□□□□□ -0.37
MUC4Q99102 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
MUC4Q99102 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
MUC4Q99102 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.72□□□□□ -0.37
MUC4Q99102 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.72□□□□□ -0.37
MUC4Q99102 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.72□□□□□ -0.37
MUC4Q99102 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.72□□□□□ -0.37
MUC4Q99102 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.72□□□□□ -0.37
MUC4Q99102 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
MUC4Q99102 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.72□□□□□ -0.37
MUC4Q99102 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
MUC4Q99102 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC12.72□□□□□ -0.37
MUC4Q99102 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
MUC4Q99102 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MUC4Q99102 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 KRT17P6-201ENST00000453795 1220 ntBASIC12.71□□□□□ -0.37
MUC4Q99102 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.71□□□□□ -0.37
MUC4Q99102 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MUC4Q99102 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.71□□□□□ -0.37
MUC4Q99102 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
MUC4Q99102 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
MUC4Q99102 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 AC046185.3-201ENST00000623228 1824 ntBASIC12.71□□□□□ -0.37
MUC4Q99102 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MUC4Q99102 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
MUC4Q99102 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.71□□□□□ -0.37
MUC4Q99102 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.71□□□□□ -0.37
MUC4Q99102 AC005336.2-201ENST00000593183 939 ntBASIC12.71□□□□□ -0.37
MUC4Q99102 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.71□□□□□ -0.37
MUC4Q99102 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MUC4Q99102 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MUC4Q99102 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
MUC4Q99102 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MUC4Q99102 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.71□□□□□ -0.38
MUC4Q99102 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MUC4Q99102 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.71□□□□□ -0.38
MUC4Q99102 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
MUC4Q99102 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
MUC4Q99102 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MUC4Q99102 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MUC4Q99102 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
MUC4Q99102 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
MUC4Q99102 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MUC4Q99102 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.7□□□□□ -0.38
MUC4Q99102 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.7□□□□□ -0.38
MUC4Q99102 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.7□□□□□ -0.38
MUC4Q99102 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.7□□□□□ -0.38
MUC4Q99102 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
MUC4Q99102 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MUC4Q99102 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
MUC4Q99102 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
MUC4Q99102 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
MUC4Q99102 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
MUC4Q99102 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.7□□□□□ -0.38
MUC4Q99102 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms