Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDK5RAP1Q96SZ6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDK5RAP1Q96SZ6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 FAM197Y3-203ENST00000618346 717 ntBASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDK5RAP1Q96SZ6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 AC005332.8-201ENST00000622750 2735 ntBASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 AL590787.1-201ENST00000568856 1315 ntBASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 AL138688.1-201ENST00000624851 1594 ntBASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 PRSS29P-201ENST00000440800 595 ntBASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 AC134043.2-201ENST00000624206 2238 ntBASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 NOC2LP2-201ENST00000407594 1944 ntBASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
CDK5RAP1Q96SZ6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 PTCHD3P3-201ENST00000403073 906 ntBASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 MED15P5-201ENST00000423150 992 ntBASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDK5RAP1Q96SZ6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms