Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 AC006504.4-201ENST00000592118 1568 ntBASIC14.15□□□□□ -0.14
ZNF48Q96MX3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 AC004832.2-201ENST00000426397 482 ntBASIC14.15□□□□□ -0.14
ZNF48Q96MX3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 KRT18P2-201ENST00000447938 1258 ntBASIC14.15□□□□□ -0.14
ZNF48Q96MX3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 AL589182.2-201ENST00000619332 1049 ntBASIC14.15□□□□□ -0.14
ZNF48Q96MX3 AC004706.3-202ENST00000621574 984 ntBASIC14.15□□□□□ -0.14
ZNF48Q96MX3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
ZNF48Q96MX3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.15□□□□□ -0.15
ZNF48Q96MX3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.15□□□□□ -0.15
ZNF48Q96MX3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 AC100803.2-201ENST00000562459 1963 ntBASIC14.14□□□□□ -0.15
ZNF48Q96MX3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 RPS8P6-201ENST00000426177 609 ntBASIC14.14□□□□□ -0.15
ZNF48Q96MX3 DNAJB3-201ENST00000446806 729 ntBASIC14.14□□□□□ -0.15
ZNF48Q96MX3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 AC002347.1-201ENST00000569543 541 ntBASIC14.14□□□□□ -0.15
ZNF48Q96MX3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 AC019129.2-201ENST00000609837 1235 ntBASIC14.14□□□□□ -0.15
ZNF48Q96MX3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 AC134043.2-201ENST00000624206 2238 ntBASIC14.14□□□□□ -0.15
ZNF48Q96MX3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF48Q96MX3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF48Q96MX3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms