Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.69■□□□□ 0.58
ALPK3Q96L96 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALPK3Q96L96 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.69■□□□□ 0.58
ALPK3Q96L96 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.69■□□□□ 0.58
ALPK3Q96L96 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALPK3Q96L96 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 RNU1-129P-201ENST00000384064 167 ntBASIC18.68■□□□□ 0.58
ALPK3Q96L96 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 AC106886.1-201ENST00000568660 600 ntBASIC18.68■□□□□ 0.58
ALPK3Q96L96 U1.21-201ENST00000580816 167 ntBASIC18.68■□□□□ 0.58
ALPK3Q96L96 AC007431.3-201ENST00000623221 587 ntBASIC18.68■□□□□ 0.58
ALPK3Q96L96 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 AC092552.1-201ENST00000547243 906 ntBASIC18.68■□□□□ 0.58
ALPK3Q96L96 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 BANF1P1-201ENST00000553684 263 ntBASIC18.68■□□□□ 0.58
ALPK3Q96L96 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 MIR4259-201ENST00000584466 101 ntBASIC18.68■□□□□ 0.58
ALPK3Q96L96 AL162274.1-201ENST00000617191 1098 ntBASIC18.68■□□□□ 0.58
ALPK3Q96L96 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALPK3Q96L96 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.68■□□□□ 0.58
ALPK3Q96L96 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.67■□□□□ 0.58
ALPK3Q96L96 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 AP3S2-216ENST00000617003 1561 ntBASIC18.67■□□□□ 0.58
ALPK3Q96L96 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
ALPK3Q96L96 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALPK3Q96L96 AC142381.1-201ENST00000426099 345 ntBASIC18.66■□□□□ 0.58
ALPK3Q96L96 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 RAB43P1-201ENST00000561790 589 ntBASIC18.66■□□□□ 0.58
ALPK3Q96L96 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 AC109635.5-201ENST00000533593 962 ntBASIC18.66■□□□□ 0.58
ALPK3Q96L96 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ALPK3Q96L96 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALPK3Q96L96 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALPK3Q96L96 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
ALPK3Q96L96 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms