Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 HYMAI.1-201ENST00000620949 238 ntBASIC15.65■□□□□ 0.1
PTP4A1Q93096 AL590326.2-201ENST00000625139 305 ntBASIC15.65■□□□□ 0.1
PTP4A1Q93096 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 AL671277.2-201ENST00000458060 996 ntBASIC15.64■□□□□ 0.09
PTP4A1Q93096 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.64■□□□□ 0.09
PTP4A1Q93096 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTP4A1Q93096 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTP4A1Q93096 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PTP4A1Q93096 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms