Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 DOC2GP-204ENST00000639052 2548 ntBASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3IL1Q8TBN0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 KRT89P-201ENST00000620027 1478 ntBASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 UBALD1-205ENST00000590891 2641 ntBASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 AL139327.4-201ENST00000612362 153 ntBASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 AC005915.1-201ENST00000624912 2018 ntBASIC17.37■□□□□ 0.37
RAB3IL1Q8TBN0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 AC024243.1-201ENST00000609234 778 ntBASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3IL1Q8TBN0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 AC046185.3-201ENST00000623228 1824 ntBASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 AC233702.5-201ENST00000584107 538 ntBASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 AC026471.5-201ENST00000615068 467 ntBASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 MIR600HG-201ENST00000449175 5984 ntBASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAB3IL1Q8TBN0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms