Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBA3Q8TBC4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 AC108860.2-201ENST00000562760 2183 ntBASIC18.4■□□□□ 0.54
UBA3Q8TBC4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 AC021087.4-201ENST00000563761 564 ntBASIC18.4■□□□□ 0.54
UBA3Q8TBC4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 AC064862.7-201ENST00000604520 867 ntBASIC18.4■□□□□ 0.54
UBA3Q8TBC4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 AL139288.1-201ENST00000623748 933 ntBASIC18.4■□□□□ 0.54
UBA3Q8TBC4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBA3Q8TBC4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
UBA3Q8TBC4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UBA3Q8TBC4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.39■□□□□ 0.54
UBA3Q8TBC4 AC097637.2-201ENST00000624096 1997 ntBASIC18.39■□□□□ 0.53
UBA3Q8TBC4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.39■□□□□ 0.53
UBA3Q8TBC4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.39■□□□□ 0.53
UBA3Q8TBC4 FAM197Y8-203ENST00000450145 560 ntBASIC18.39■□□□□ 0.53
UBA3Q8TBC4 SCARNA2-201ENST00000458748 420 ntBASIC18.39■□□□□ 0.53
UBA3Q8TBC4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 MTDHP4-201ENST00000600287 670 ntBASIC18.39■□□□□ 0.53
UBA3Q8TBC4 AC104692.2-201ENST00000603054 253 ntBASIC18.39■□□□□ 0.53
UBA3Q8TBC4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 AL022326.1-202ENST00000641533 845 ntBASIC18.39■□□□□ 0.53
UBA3Q8TBC4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 AC012313.1-201ENST00000593393 3059 ntBASIC18.39■□□□□ 0.53
UBA3Q8TBC4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.39■□□□□ 0.53
UBA3Q8TBC4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 TPM4P1-201ENST00000436100 807 ntBASIC18.38■□□□□ 0.53
UBA3Q8TBC4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UBA3Q8TBC4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms