Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 RBM17P3-201ENST00000417687 1192 ntBASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 TSPY19P-201ENST00000418461 509 ntBASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 TSPY18P-201ENST00000441642 509 ntBASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 SIGLEC30P-201ENST00000455569 941 ntBASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 PRORSD1P-202ENST00000563365 2154 ntBASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRFBP1Q8NEF9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 AC132008.2-207ENST00000454517 770 ntBASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 KRT18P56-201ENST00000507275 550 ntBASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 AP005117.1-201ENST00000584346 1413 ntBASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 SIGLEC16-201ENST00000599858 1437 ntBASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 CROCCP2-202ENST00000412962 2773 ntBASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SRFBP1Q8NEF9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SRFBP1Q8NEF9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.58■□□□□ 0.25
SRFBP1Q8NEF9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
SRFBP1Q8NEF9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.58■□□□□ 0.25
SRFBP1Q8NEF9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SRFBP1Q8NEF9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.58■□□□□ 0.25
SRFBP1Q8NEF9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 AC106795.1-205ENST00000512851 1056 ntBASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SRFBP1Q8NEF9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms