Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 AL118508.1-201ENST00000613502 2345 ntBASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 AL596257.1-201ENST00000641463 2694 ntBASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SIMC1Q8NDZ2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 NUS1P2-201ENST00000417358 873 ntBASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 KRT8P10-201ENST00000450021 1447 ntBASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SIMC1Q8NDZ2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 CICP6-201ENST00000457191 2729 ntBASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 FAM220CP-201ENST00000395253 831 ntBASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 AL450487.1-201ENST00000426799 995 ntBASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SIMC1Q8NDZ2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SIMC1Q8NDZ2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SIMC1Q8NDZ2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms