Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 AC016396.2-201ENST00000562575 1417 ntBASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB42Q8N4Z0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 AC067852.2-201ENST00000590513 2313 ntBASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RAB42Q8N4Z0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 RN7SL510P-201ENST00000581311 263 ntBASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 AL022326.1-202ENST00000641533 845 ntBASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB42Q8N4Z0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
RAB42Q8N4Z0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB42Q8N4Z0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB42Q8N4Z0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RAB42Q8N4Z0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB42Q8N4Z0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB42Q8N4Z0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RAB42Q8N4Z0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB42Q8N4Z0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB42Q8N4Z0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms