Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 AP002414.1-201ENST00000391405 1147 ntBASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 AF228730.7-201ENST00000641842 219 ntBASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ARHGEF39Q8N4T4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 CROCCP2-202ENST00000412962 2773 ntBASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 Z83851.2-201ENST00000609564 659 ntBASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 MIR1199-201ENST00000621445 119 ntBASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.35■□□□□ 0.21
ARHGEF39Q8N4T4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 LETM1P2-201ENST00000597330 2178 ntBASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 PAWRP1-201ENST00000451083 565 ntBASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 AC005593.1-201ENST00000624894 515 ntBASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms