Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
VPS8Q8N3P4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 CD63-210ENST00000550776 870 ntTSL 5 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 KRT19P2-202ENST00000557173 1012 ntBASIC26.93■■□□□ 1.9
VPS8Q8N3P4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
VPS8Q8N3P4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 AC023274.1-201ENST00000418278 595 ntBASIC26.92■■□□□ 1.9
VPS8Q8N3P4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC26.92■■□□□ 1.9
VPS8Q8N3P4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 AL645608.8-201ENST00000606034 2086 ntBASIC26.92■■□□□ 1.9
VPS8Q8N3P4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
VPS8Q8N3P4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 GPX1P2-201ENST00000429271 606 ntBASIC26.91■■□□□ 1.9
VPS8Q8N3P4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
VPS8Q8N3P4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 DDT-204ENST00000404092 805 ntTSL 3 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 MCCD1P2-201ENST00000423228 335 ntBASIC26.9■■□□□ 1.9
VPS8Q8N3P4 FAM185BP-201ENST00000443595 716 ntBASIC26.9■■□□□ 1.9
VPS8Q8N3P4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC26.9■■□□□ 1.9
VPS8Q8N3P4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 AC129492.6-201ENST00000611383 1305 ntBASIC26.9■■□□□ 1.9
VPS8Q8N3P4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
VPS8Q8N3P4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
VPS8Q8N3P4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms