Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.23■□□□□ 0.19
DEPDC4Q8N2C3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEPDC4Q8N2C3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DEPDC4Q8N2C3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DEPDC4Q8N2C3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 MIR4674-201ENST00000582457 87 ntBASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 PCDHA14-201ENST00000506751 2298 ntBASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 LINC00554-201ENST00000564841 3011 ntBASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
DEPDC4Q8N2C3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 AC104390.1-201ENST00000555663 520 ntBASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 UBALD1-205ENST00000590891 2641 ntBASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
DEPDC4Q8N2C3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
DEPDC4Q8N2C3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
DEPDC4Q8N2C3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
DEPDC4Q8N2C3 AC092850.2-201ENST00000623821 2697 ntBASIC16.21■□□□□ 0.18
DEPDC4Q8N2C3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.21■□□□□ 0.18
DEPDC4Q8N2C3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.2■□□□□ 0.18
DEPDC4Q8N2C3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms