Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18■□□□□ 0.47
SCML4Q8N228 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SCML4Q8N228 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18■□□□□ 0.47
SCML4Q8N228 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SCML4Q8N228 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18■□□□□ 0.47
SCML4Q8N228 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SCML4Q8N228 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SCML4Q8N228 AL023806.1-201ENST00000603994 1649 ntBASIC18■□□□□ 0.47
SCML4Q8N228 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18■□□□□ 0.47
SCML4Q8N228 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SCML4Q8N228 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SCML4Q8N228 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SCML4Q8N228 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
SCML4Q8N228 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.99■□□□□ 0.47
SCML4Q8N228 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SCML4Q8N228 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.99■□□□□ 0.47
SCML4Q8N228 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SCML4Q8N228 FZD10-202ENST00000539839 3282 ntBASIC17.99■□□□□ 0.47
SCML4Q8N228 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.99■□□□□ 0.47
SCML4Q8N228 AC009947.1-201ENST00000444350 727 ntBASIC17.99■□□□□ 0.47
SCML4Q8N228 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.99■□□□□ 0.47
SCML4Q8N228 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.99■□□□□ 0.47
SCML4Q8N228 AC124947.2-201ENST00000547118 1133 ntBASIC17.99■□□□□ 0.47
SCML4Q8N228 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.99■□□□□ 0.47
SCML4Q8N228 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.99■□□□□ 0.47
SCML4Q8N228 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SCML4Q8N228 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.99■□□□□ 0.47
SCML4Q8N228 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SCML4Q8N228 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 Z83851.2-201ENST00000609564 659 ntBASIC17.99■□□□□ 0.47
SCML4Q8N228 AC120114.3-201ENST00000611923 658 ntBASIC17.99■□□□□ 0.47
SCML4Q8N228 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
SCML4Q8N228 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.99■□□□□ 0.47
SCML4Q8N228 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCML4Q8N228 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.99■□□□□ 0.47
SCML4Q8N228 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
SCML4Q8N228 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SCML4Q8N228 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SCML4Q8N228 PCDHB18P-201ENST00000524813 2368 ntBASIC17.98■□□□□ 0.47
SCML4Q8N228 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 LINC02012-201ENST00000608206 1725 ntBASIC17.98■□□□□ 0.47
SCML4Q8N228 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.98■□□□□ 0.47
SCML4Q8N228 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SCML4Q8N228 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.98■□□□□ 0.47
SCML4Q8N228 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.98■□□□□ 0.47
SCML4Q8N228 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.98■□□□□ 0.47
SCML4Q8N228 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.98■□□□□ 0.47
SCML4Q8N228 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.98■□□□□ 0.47
SCML4Q8N228 PRSS29P-201ENST00000440800 595 ntBASIC17.98■□□□□ 0.47
SCML4Q8N228 RPL13AP23-201ENST00000480739 586 ntBASIC17.98■□□□□ 0.47
SCML4Q8N228 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.98■□□□□ 0.47
SCML4Q8N228 AC034105.1-201ENST00000563488 319 ntBASIC17.98■□□□□ 0.47
SCML4Q8N228 AC106730.1-201ENST00000566722 1090 ntBASIC17.98■□□□□ 0.47
SCML4Q8N228 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.98■□□□□ 0.47
SCML4Q8N228 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.98■□□□□ 0.47
SCML4Q8N228 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.98■□□□□ 0.47
SCML4Q8N228 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.98■□□□□ 0.47
SCML4Q8N228 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.98■□□□□ 0.47
SCML4Q8N228 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SCML4Q8N228 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.98■□□□□ 0.47
SCML4Q8N228 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SCML4Q8N228 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.98■□□□□ 0.47
SCML4Q8N228 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.98■□□□□ 0.47
SCML4Q8N228 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.98■□□□□ 0.47
SCML4Q8N228 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms