Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM42Q8IWZ5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 AC007663.1-201ENST00000438948 1240 ntBASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM42Q8IWZ5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM42Q8IWZ5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 AC046185.3-201ENST00000623228 1824 ntBASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 NAPSB-206ENST00000562112 1266 ntBASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 CYP2D8P-201ENST00000433633 1490 ntBASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM42Q8IWZ5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM42Q8IWZ5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms