Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CRLF3Q8IUI8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 AL031133.1-201ENST00000406807 723 ntBASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 PCDH8P1-201ENST00000428983 2773 ntBASIC17.4■□□□□ 0.38
CRLF3Q8IUI8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.39■□□□□ 0.38
CRLF3Q8IUI8 AL139384.1-201ENST00000612143 3047 ntBASIC17.39■□□□□ 0.38
CRLF3Q8IUI8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CRLF3Q8IUI8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CRLF3Q8IUI8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CRLF3Q8IUI8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 FLJ38576-201ENST00000623820 2459 ntBASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 DOC2GP-204ENST00000639052 2548 ntBASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 KRT18P38-201ENST00000449496 1282 ntBASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 GCSHP2-201ENST00000560971 527 ntBASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 AC046158.3-201ENST00000624947 2558 ntBASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CRLF3Q8IUI8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 LYSMD4-203ENST00000378904 2122 ntBASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRLF3Q8IUI8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms