Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 MIR940-201ENST00000401276 94 ntBASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 KRT18P3-201ENST00000451602 1288 ntBASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 AL353135.1-201ENST00000606729 504 ntBASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 GPR89P-201ENST00000407924 1495 ntBASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 AC097637.2-201ENST00000624096 1997 ntBASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.07■□□□□ 0.16
H3F3CQ6NXT2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 ACTG1P4-201ENST00000425123 1122 ntBASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 AC108751.1-201ENST00000490852 363 ntBASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 AC008667.4-201ENST00000607370 168 ntBASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 GPALPP1-207ENST00000611650 899 ntBASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H3F3CQ6NXT2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 LINC00982-205ENST00000420957 435 ntBASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 RPS15P9-201ENST00000494093 319 ntBASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 IGHV3-65-201ENST00000523210 341 ntBASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.05■□□□□ 0.16
H3F3CQ6NXT2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms