Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.25■□□□□ 0.51
RNF43Q68DV7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.25■□□□□ 0.51
RNF43Q68DV7 AP000867.4-201ENST00000641616 219 ntBASIC18.25■□□□□ 0.51
RNF43Q68DV7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 AP001094.4-201ENST00000579008 2176 ntBASIC18.25■□□□□ 0.51
RNF43Q68DV7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 AP005117.1-201ENST00000584346 1413 ntBASIC18.24■□□□□ 0.51
RNF43Q68DV7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 COX5BP2-201ENST00000392354 334 ntBASIC18.24■□□□□ 0.51
RNF43Q68DV7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF43Q68DV7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF43Q68DV7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 AC008608.2-201ENST00000606089 416 ntBASIC18.23■□□□□ 0.51
RNF43Q68DV7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 BCL2-203ENST00000589955 5011 ntBASIC18.23■□□□□ 0.51
RNF43Q68DV7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF43Q68DV7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 AL121761.2-201ENST00000598007 1648 ntBASIC18.23■□□□□ 0.51
RNF43Q68DV7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF43Q68DV7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms