Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SEL1L3Q68CR1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEL1L3Q68CR1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.76■□□□□ 0.43
SEL1L3Q68CR1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEL1L3Q68CR1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 AC097374.2-201ENST00000618617 1306 ntBASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 AL031284.1-201ENST00000419297 478 ntBASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 RNPS1P1-201ENST00000507437 918 ntBASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 AC120114.3-201ENST00000611923 658 ntBASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SEL1L3Q68CR1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 AL023806.1-201ENST00000603994 1649 ntBASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 AL590627.1-203ENST00000421194 1026 ntBASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 AC096633.1-201ENST00000422446 749 ntBASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 AC018712.1-201ENST00000455767 687 ntBASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 SART3-203ENST00000546611 1184 ntBASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 AL049840.3-201ENST00000602669 611 ntBASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SEL1L3Q68CR1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 AC022898.2-201ENST00000616822 1312 ntBASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEL1L3Q68CR1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms