Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 RNF216P1-203ENST00000404404 2427 ntBASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RUNDC3AQ59EK9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 AC078925.2-201ENST00000624013 1973 ntBASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 AC087499.1-201ENST00000418141 1075 ntBASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 AC124947.2-201ENST00000547118 1133 ntBASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.44■□□□□ 0.22
RUNDC3AQ59EK9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 HBZP1-201ENST00000354915 429 ntBASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 ATP5G1P1-201ENST00000448724 379 ntBASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 IGHV3-52-201ENST00000519770 353 ntBASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 AC109462.3-201ENST00000573934 613 ntBASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 AL390719.2-201ENST00000606993 987 ntBASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 NFIC-211ENST00000641145 8399 ntBASIC16.43■□□□□ 0.22
RUNDC3AQ59EK9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RUNDC3AQ59EK9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms