Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTC1Q2NKJ3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 FAM58CP-201ENST00000435741 640 ntBASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 AC138761.1-201ENST00000584393 385 ntBASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 AC004835.2-201ENST00000603762 682 ntBASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 AL805961.1-202ENST00000641562 540 ntBASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 AC132938.5-201ENST00000624980 1813 ntBASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 AC148477.5-201ENST00000625164 1645 ntBASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTC1Q2NKJ3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 BCAR1-209ENST00000546196 1340 ntBASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 MRPL20P1-201ENST00000400819 433 ntBASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 AC092474.2-201ENST00000424288 719 ntBASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 AC074386.1-202ENST00000463561 864 ntBASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 AC004449.1-201ENST00000564240 433 ntBASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTC1Q2NKJ3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms