Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC10.61□□□□□ -0.71
HSPG2P98160 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.61□□□□□ -0.71
HSPG2P98160 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.61□□□□□ -0.71
HSPG2P98160 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC10.61□□□□□ -0.71
HSPG2P98160 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.61□□□□□ -0.71
HSPG2P98160 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 AC087499.5-201ENST00000452760 1342 ntBASIC10.61□□□□□ -0.71
HSPG2P98160 BTBD7P1-201ENST00000447253 1453 ntBASIC10.61□□□□□ -0.71
HSPG2P98160 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
HSPG2P98160 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.61□□□□□ -0.71
HSPG2P98160 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC10.61□□□□□ -0.71
HSPG2P98160 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC10.61□□□□□ -0.71
HSPG2P98160 APOC4-201ENST00000591600 348 ntTSL 3 BASIC10.61□□□□□ -0.71
HSPG2P98160 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.61□□□□□ -0.71
HSPG2P98160 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 AC126763.1-201ENST00000552015 2118 ntBASIC10.61□□□□□ -0.71
HSPG2P98160 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
HSPG2P98160 AC020907.1-201ENST00000616460 1350 ntBASIC10.61□□□□□ -0.71
HSPG2P98160 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
HSPG2P98160 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HSPG2P98160 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC10.61□□□□□ -0.71
HSPG2P98160 AC027307.2-201ENST00000591252 911 ntBASIC10.61□□□□□ -0.71
HSPG2P98160 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 AL135999.2-201ENST00000622438 1686 ntBASIC10.6□□□□□ -0.71
HSPG2P98160 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 AC135586.1-201ENST00000539323 574 ntBASIC10.6□□□□□ -0.71
HSPG2P98160 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.6□□□□□ -0.71
HSPG2P98160 AP005482.1-201ENST00000563722 1273 ntBASIC10.6□□□□□ -0.71
HSPG2P98160 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 AC008267.7-201ENST00000624570 1194 ntBASIC10.6□□□□□ -0.71
HSPG2P98160 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 BID-204ENST00000399767 2129 ntTSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 AC093525.8-201ENST00000624099 1342 ntBASIC10.6□□□□□ -0.71
HSPG2P98160 CDC14C-201ENST00000428251 1719 ntBASIC10.6□□□□□ -0.71
HSPG2P98160 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 AC006538.1-201ENST00000567905 1585 ntBASIC10.6□□□□□ -0.71
HSPG2P98160 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
HSPG2P98160 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC10.6□□□□□ -0.71
HSPG2P98160 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.6□□□□□ -0.71
HSPG2P98160 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.6□□□□□ -0.71
HSPG2P98160 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC10.6□□□□□ -0.71
HSPG2P98160 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC10.6□□□□□ -0.71
HSPG2P98160 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
HSPG2P98160 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC10.6□□□□□ -0.71
HSPG2P98160 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
HSPG2P98160 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC10.6□□□□□ -0.71
HSPG2P98160 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HSPG2P98160 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
HSPG2P98160 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
HSPG2P98160 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HSPG2P98160 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
HSPG2P98160 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
HSPG2P98160 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
HSPG2P98160 AL513480.1-201ENST00000451731 511 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms