Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
IRX4P78413 AC073648.2-201ENST00000510116 352 ntBASIC18.12■□□□□ 0.49
IRX4P78413 AC139887.3-201ENST00000568585 713 ntBASIC18.12■□□□□ 0.49
IRX4P78413 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.12■□□□□ 0.49
IRX4P78413 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
IRX4P78413 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.12■□□□□ 0.49
IRX4P78413 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.12■□□□□ 0.49
IRX4P78413 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IRX4P78413 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
IRX4P78413 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.11■□□□□ 0.49
IRX4P78413 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 AC009053.2-201ENST00000563701 2365 ntBASIC18.11■□□□□ 0.49
IRX4P78413 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 AC018712.1-201ENST00000455767 687 ntBASIC18.11■□□□□ 0.49
IRX4P78413 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.11■□□□□ 0.49
IRX4P78413 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.11■□□□□ 0.49
IRX4P78413 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 KRT89P-201ENST00000620027 1478 ntBASIC18.11■□□□□ 0.49
IRX4P78413 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
IRX4P78413 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
IRX4P78413 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
IRX4P78413 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.11■□□□□ 0.49
IRX4P78413 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.11■□□□□ 0.49
IRX4P78413 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.11■□□□□ 0.49
IRX4P78413 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IRX4P78413 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IRX4P78413 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
IRX4P78413 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IRX4P78413 AC108860.2-201ENST00000562760 2183 ntBASIC18.1■□□□□ 0.49
IRX4P78413 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.1■□□□□ 0.49
IRX4P78413 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.1■□□□□ 0.49
IRX4P78413 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 ZNF259P1-201ENST00000407656 1365 ntBASIC18.1■□□□□ 0.49
IRX4P78413 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IRX4P78413 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.1■□□□□ 0.49
IRX4P78413 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
IRX4P78413 AC096582.2-201ENST00000510860 516 ntBASIC18.1■□□□□ 0.49
IRX4P78413 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.1■□□□□ 0.49
IRX4P78413 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.1■□□□□ 0.49
IRX4P78413 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
IRX4P78413 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.1■□□□□ 0.49
IRX4P78413 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IRX4P78413 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
IRX4P78413 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms