Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.56■□□□□ 0.4
PRAMEP78395 MIR1224-201ENST00000408193 85 ntBASIC17.56■□□□□ 0.4
PRAMEP78395 AP002383.4-201ENST00000442518 975 ntBASIC17.56■□□□□ 0.4
PRAMEP78395 LINC00265-3P-201ENST00000447588 903 ntBASIC17.56■□□□□ 0.4
PRAMEP78395 MINOS1P3-201ENST00000457048 203 ntBASIC17.56■□□□□ 0.4
PRAMEP78395 TOB2P1-201ENST00000469761 992 ntBASIC17.56■□□□□ 0.4
PRAMEP78395 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.56■□□□□ 0.4
PRAMEP78395 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 AC010331.1-201ENST00000611423 582 ntBASIC17.56■□□□□ 0.4
PRAMEP78395 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PRAMEP78395 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PRAMEP78395 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEP78395 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEP78395 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PRAMEP78395 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEP78395 AC016396.2-201ENST00000562575 1417 ntBASIC17.55■□□□□ 0.4
PRAMEP78395 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEP78395 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PRAMEP78395 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEP78395 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEP78395 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PRAMEP78395 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 AC080080.1-201ENST00000625121 2420 ntBASIC17.55■□□□□ 0.4
PRAMEP78395 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEP78395 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.55■□□□□ 0.4
PRAMEP78395 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.55■□□□□ 0.4
PRAMEP78395 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.55■□□□□ 0.4
PRAMEP78395 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEP78395 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.55■□□□□ 0.4
PRAMEP78395 AP005901.3-202ENST00000581653 237 ntBASIC17.55■□□□□ 0.4
PRAMEP78395 AC019129.2-201ENST00000609837 1235 ntBASIC17.55■□□□□ 0.4
PRAMEP78395 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PRAMEP78395 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.55■□□□□ 0.4
PRAMEP78395 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEP78395 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEP78395 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PRAMEP78395 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEP78395 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEP78395 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEP78395 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEP78395 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEP78395 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEP78395 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEP78395 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEP78395 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.54■□□□□ 0.4
PRAMEP78395 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEP78395 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PRAMEP78395 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEP78395 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEP78395 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEP78395 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PRAMEP78395 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEP78395 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEP78395 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PRAMEP78395 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEP78395 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms