Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RN7SL510P-201ENST00000581311 263 ntBASIC18.85■□□□□ 0.61
SNRPFP62306 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 AC064862.7-201ENST00000604520 867 ntBASIC18.85■□□□□ 0.61
SNRPFP62306 AC025062.2-201ENST00000605477 670 ntBASIC18.85■□□□□ 0.61
SNRPFP62306 AC004706.3-202ENST00000621574 984 ntBASIC18.85■□□□□ 0.61
SNRPFP62306 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.85■□□□□ 0.61
SNRPFP62306 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SNRPFP62306 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SNRPFP62306 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SNRPFP62306 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNRPFP62306 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SNRPFP62306 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.84■□□□□ 0.61
SNRPFP62306 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 AL590787.1-201ENST00000568856 1315 ntBASIC18.84■□□□□ 0.61
SNRPFP62306 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.84■□□□□ 0.61
SNRPFP62306 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRPFP62306 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.84■□□□□ 0.61
SNRPFP62306 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.84■□□□□ 0.61
SNRPFP62306 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.84■□□□□ 0.61
SNRPFP62306 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.84■□□□□ 0.61
SNRPFP62306 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRPFP62306 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.84■□□□□ 0.61
SNRPFP62306 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNRPFP62306 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRPFP62306 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNRPFP62306 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRPFP62306 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.84■□□□□ 0.61
SNRPFP62306 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNRPFP62306 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNRPFP62306 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNRPFP62306 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNRPFP62306 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNRPFP62306 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNRPFP62306 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.83■□□□□ 0.61
SNRPFP62306 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNRPFP62306 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.83■□□□□ 0.61
SNRPFP62306 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SNRPFP62306 AC138932.1-201ENST00000534164 6830 ntBASIC18.83■□□□□ 0.61
SNRPFP62306 AL121761.2-201ENST00000598007 1648 ntBASIC18.83■□□□□ 0.61
SNRPFP62306 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPFP62306 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.83■□□□□ 0.6
SNRPFP62306 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.83■□□□□ 0.6
SNRPFP62306 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.83■□□□□ 0.6
SNRPFP62306 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPFP62306 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPFP62306 AC073648.2-201ENST00000510116 352 ntBASIC18.83■□□□□ 0.6
SNRPFP62306 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.83■□□□□ 0.6
SNRPFP62306 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.83■□□□□ 0.6
SNRPFP62306 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
SNRPFP62306 AC107918.4-202ENST00000641623 219 ntBASIC18.83■□□□□ 0.6
SNRPFP62306 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPFP62306 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.83■□□□□ 0.6
SNRPFP62306 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPFP62306 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPFP62306 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.83■□□□□ 0.6
SNRPFP62306 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.83■□□□□ 0.6
SNRPFP62306 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPFP62306 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPFP62306 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRPFP62306 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNRPFP62306 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.82■□□□□ 0.6
SNRPFP62306 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.82■□□□□ 0.6
SNRPFP62306 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.82■□□□□ 0.6
SNRPFP62306 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.82■□□□□ 0.6
SNRPFP62306 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
SNRPFP62306 AC006557.2-201ENST00000592985 1240 ntBASIC18.82■□□□□ 0.6
SNRPFP62306 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNRPFP62306 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNRPFP62306 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.82■□□□□ 0.6
SNRPFP62306 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.82■□□□□ 0.6
SNRPFP62306 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRPFP62306 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRPFP62306 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms