Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.32■□□□□ 0.04
UBE2NP61088 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBE2NP61088 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBE2NP61088 REXO1L11P-201ENST00000620964 1927 ntBASIC15.31■□□□□ 0.04
UBE2NP61088 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBE2NP61088 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2NP61088 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBE2NP61088 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.31■□□□□ 0.04
UBE2NP61088 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 AC079781.3-201ENST00000449110 356 ntBASIC15.31■□□□□ 0.04
UBE2NP61088 SIGLEC30P-201ENST00000455569 941 ntBASIC15.31■□□□□ 0.04
UBE2NP61088 AF186996.4-201ENST00000467186 377 ntBASIC15.31■□□□□ 0.04
UBE2NP61088 AL160237.2-201ENST00000556165 472 ntBASIC15.31■□□□□ 0.04
UBE2NP61088 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.31■□□□□ 0.04
UBE2NP61088 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2NP61088 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2NP61088 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2NP61088 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
UBE2NP61088 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBE2NP61088 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
UBE2NP61088 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.31■□□□□ 0.04
UBE2NP61088 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 AL355312.1-201ENST00000407115 2176 ntBASIC15.31■□□□□ 0.04
UBE2NP61088 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBE2NP61088 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2NP61088 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
UBE2NP61088 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
UBE2NP61088 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 FAM197Y8-203ENST00000450145 560 ntBASIC15.3■□□□□ 0.04
UBE2NP61088 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2NP61088 AC133963.1-201ENST00000504166 1679 ntBASIC15.3■□□□□ 0.04
UBE2NP61088 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.3■□□□□ 0.04
UBE2NP61088 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2NP61088 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2NP61088 STK25P1-201ENST00000585406 838 ntBASIC15.3■□□□□ 0.04
UBE2NP61088 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.3■□□□□ 0.04
UBE2NP61088 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.3■□□□□ 0.04
UBE2NP61088 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBE2NP61088 AC079776.2-201ENST00000641154 1609 ntBASIC15.3■□□□□ 0.04
UBE2NP61088 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBE2NP61088 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.3■□□□□ 0.04
UBE2NP61088 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
UBE2NP61088 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBE2NP61088 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.29■□□□□ 0.04
UBE2NP61088 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 NOC2LP2-201ENST00000407594 1944 ntBASIC15.29■□□□□ 0.04
UBE2NP61088 LINC00304-203ENST00000565008 1864 ntBASIC15.29■□□□□ 0.04
UBE2NP61088 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.29■□□□□ 0.04
UBE2NP61088 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBE2NP61088 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.29■□□□□ 0.04
UBE2NP61088 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.29■□□□□ 0.04
UBE2NP61088 SPDYE21P-201ENST00000413323 827 ntBASIC15.29■□□□□ 0.04
UBE2NP61088 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
UBE2NP61088 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.29■□□□□ 0.04
UBE2NP61088 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.29■□□□□ 0.04
UBE2NP61088 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.29■□□□□ 0.04
UBE2NP61088 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.29■□□□□ 0.04
UBE2NP61088 NKAPP1-205ENST00000585790 367 ntBASIC15.29■□□□□ 0.04
UBE2NP61088 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.29■□□□□ 0.04
UBE2NP61088 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBE2NP61088 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms