Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLDN2P57739 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN2P57739 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLDN2P57739 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CLDN2P57739 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN2P57739 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLDN2P57739 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN2P57739 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN2P57739 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.13■□□□□ 0.33
CLDN2P57739 ACTG1P4-201ENST00000425123 1122 ntBASIC17.13■□□□□ 0.33
CLDN2P57739 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN2P57739 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN2P57739 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN2P57739 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.13■□□□□ 0.33
CLDN2P57739 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
CLDN2P57739 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN2P57739 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 AL139327.4-201ENST00000612362 153 ntBASIC17.13■□□□□ 0.33
CLDN2P57739 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CLDN2P57739 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLDN2P57739 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLDN2P57739 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLDN2P57739 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN2P57739 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN2P57739 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN2P57739 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN2P57739 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN2P57739 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN2P57739 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN2P57739 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN2P57739 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN2P57739 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN2P57739 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN2P57739 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN2P57739 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN2P57739 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.12■□□□□ 0.33
CLDN2P57739 MCCD1P2-201ENST00000423228 335 ntBASIC17.12■□□□□ 0.33
CLDN2P57739 AC004967.1-201ENST00000453589 447 ntBASIC17.12■□□□□ 0.33
CLDN2P57739 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN2P57739 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN2P57739 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN2P57739 GGTLC5P-201ENST00000617623 998 ntBASIC17.12■□□□□ 0.33
CLDN2P57739 AC010507.1-201ENST00000633895 436 ntBASIC17.12■□□□□ 0.33
CLDN2P57739 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN2P57739 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN2P57739 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN2P57739 AC002310.6-201ENST00000624451 1377 ntBASIC17.12■□□□□ 0.33
CLDN2P57739 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLDN2P57739 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN2P57739 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN2P57739 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CLDN2P57739 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLDN2P57739 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN2P57739 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
CLDN2P57739 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDN2P57739 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN2P57739 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN2P57739 AC006116.8-202ENST00000587620 1550 ntBASIC17.11■□□□□ 0.33
CLDN2P57739 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN2P57739 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLDN2P57739 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN2P57739 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN2P57739 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN2P57739 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN2P57739 ALG1L5P-201ENST00000482043 771 ntBASIC17.11■□□□□ 0.33
CLDN2P57739 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN2P57739 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN2P57739 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN2P57739 LINC01451-201ENST00000623792 534 ntBASIC17.11■□□□□ 0.33
CLDN2P57739 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLDN2P57739 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CLDN2P57739 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN2P57739 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLDN2P57739 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN2P57739 AL133373.2-201ENST00000623187 2828 ntBASIC17.11■□□□□ 0.33
CLDN2P57739 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN2P57739 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms