Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.98□□□□□ -0.17
PAX9P55771 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.98□□□□□ -0.17
PAX9P55771 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PAX9P55771 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PAX9P55771 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PAX9P55771 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.97□□□□□ -0.17
PAX9P55771 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX9P55771 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.97□□□□□ -0.17
PAX9P55771 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 TSPY14P-201ENST00000303979 915 ntBASIC13.97□□□□□ -0.17
PAX9P55771 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 NEK4P2-201ENST00000580004 1012 ntBASIC13.97□□□□□ -0.17
PAX9P55771 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.97□□□□□ -0.17
PAX9P55771 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX9P55771 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX9P55771 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX9P55771 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.97□□□□□ -0.17
PAX9P55771 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.97□□□□□ -0.17
PAX9P55771 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PAX9P55771 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX9P55771 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.97□□□□□ -0.17
PAX9P55771 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.97□□□□□ -0.17
PAX9P55771 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.97□□□□□ -0.17
PAX9P55771 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.96□□□□□ -0.17
PAX9P55771 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.96□□□□□ -0.17
PAX9P55771 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
PAX9P55771 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
PAX9P55771 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.96□□□□□ -0.17
PAX9P55771 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 AC092364.2-201ENST00000596710 2692 ntBASIC13.96□□□□□ -0.17
PAX9P55771 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PAX9P55771 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.96□□□□□ -0.17
PAX9P55771 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.96□□□□□ -0.17
PAX9P55771 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.96□□□□□ -0.17
PAX9P55771 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.96□□□□□ -0.17
PAX9P55771 MIR4785-201ENST00000585005 73 ntBASIC13.96□□□□□ -0.17
PAX9P55771 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.96□□□□□ -0.17
PAX9P55771 AP000525.1-201ENST00000608286 694 ntBASIC13.96□□□□□ -0.17
PAX9P55771 AC004263.2-201ENST00000617183 678 ntBASIC13.96□□□□□ -0.17
PAX9P55771 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.96□□□□□ -0.17
PAX9P55771 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.96□□□□□ -0.17
PAX9P55771 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PAX9P55771 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PAX9P55771 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PAX9P55771 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
PAX9P55771 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PAX9P55771 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PAX9P55771 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PAX9P55771 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
PAX9P55771 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
PAX9P55771 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.96□□□□□ -0.18
PAX9P55771 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
PAX9P55771 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
PAX9P55771 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.95□□□□□ -0.18
PAX9P55771 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.95□□□□□ -0.18
PAX9P55771 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
PAX9P55771 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms