Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDH11P55287 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDH11P55287 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH11P55287 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH11P55287 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH11P55287 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH11P55287 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.96■□□□□ 0.15
CDH11P55287 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH11P55287 AC092119.3-201ENST00000612618 583 ntBASIC15.96■□□□□ 0.15
CDH11P55287 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH11P55287 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH11P55287 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDH11P55287 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH11P55287 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH11P55287 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH11P55287 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH11P55287 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDH11P55287 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH11P55287 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CDH11P55287 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.96■□□□□ 0.14
CDH11P55287 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH11P55287 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
CDH11P55287 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH11P55287 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH11P55287 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH11P55287 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH11P55287 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CDH11P55287 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH11P55287 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH11P55287 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 ATP5G2P1-201ENST00000433580 426 ntBASIC15.95■□□□□ 0.14
CDH11P55287 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
CDH11P55287 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.95■□□□□ 0.14
CDH11P55287 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH11P55287 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH11P55287 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH11P55287 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH11P55287 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDH11P55287 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH11P55287 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH11P55287 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CDH11P55287 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.94■□□□□ 0.14
CDH11P55287 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CDH11P55287 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 TSSC2-201ENST00000450217 709 ntBASIC15.94■□□□□ 0.14
CDH11P55287 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CDH11P55287 KRT126P-201ENST00000549467 1181 ntBASIC15.94■□□□□ 0.14
CDH11P55287 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
CDH11P55287 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH11P55287 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH11P55287 CLEC4GP1-201ENST00000596555 870 ntBASIC15.94■□□□□ 0.14
CDH11P55287 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH11P55287 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH11P55287 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms