Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.74□□□□□ -0.37
APOC4P55056 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 MED15P5-201ENST00000423150 992 ntBASIC12.74□□□□□ -0.37
APOC4P55056 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 KRT18P27-201ENST00000427733 1299 ntBASIC12.74□□□□□ -0.37
APOC4P55056 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 SLC25A1P1-201ENST00000528351 927 ntBASIC12.74□□□□□ -0.37
APOC4P55056 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.74□□□□□ -0.37
APOC4P55056 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.74□□□□□ -0.37
APOC4P55056 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 AC012640.2-201ENST00000561606 901 ntBASIC12.74□□□□□ -0.37
APOC4P55056 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC4P55056 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
APOC4P55056 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.73□□□□□ -0.37
APOC4P55056 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 PMS2P7-201ENST00000506558 1336 ntBASIC12.73□□□□□ -0.37
APOC4P55056 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 MIR574-201ENST00000385209 96 ntBASIC12.73□□□□□ -0.37
APOC4P55056 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 MIR940-201ENST00000401276 94 ntBASIC12.73□□□□□ -0.37
APOC4P55056 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 ACTG1P4-201ENST00000425123 1122 ntBASIC12.73□□□□□ -0.37
APOC4P55056 RNA5SP416-201ENST00000516838 111 ntBASIC12.73□□□□□ -0.37
APOC4P55056 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.73□□□□□ -0.37
APOC4P55056 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 AL139327.4-201ENST00000612362 153 ntBASIC12.73□□□□□ -0.37
APOC4P55056 FAM197Y3-203ENST00000618346 717 ntBASIC12.73□□□□□ -0.37
APOC4P55056 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC4P55056 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC4P55056 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC4P55056 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms