Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H2P55055 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NR1H2P55055 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 AC105917.1-201ENST00000506637 2539 ntBASIC16.54■□□□□ 0.24
NR1H2P55055 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NR1H2P55055 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H2P55055 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H2P55055 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.54■□□□□ 0.24
NR1H2P55055 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 AP003041.3-201ENST00000527151 707 ntBASIC16.54■□□□□ 0.24
NR1H2P55055 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H2P55055 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H2P55055 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H2P55055 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.54■□□□□ 0.24
NR1H2P55055 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.54■□□□□ 0.24
NR1H2P55055 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NR1H2P55055 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NR1H2P55055 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H2P55055 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H2P55055 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H2P55055 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NR1H2P55055 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NR1H2P55055 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.54■□□□□ 0.24
NR1H2P55055 AC132872.4-202ENST00000622924 2756 ntBASIC16.54■□□□□ 0.24
NR1H2P55055 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NR1H2P55055 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NR1H2P55055 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.53■□□□□ 0.24
NR1H2P55055 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.53■□□□□ 0.24
NR1H2P55055 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.53■□□□□ 0.24
NR1H2P55055 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.53■□□□□ 0.24
NR1H2P55055 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NR1H2P55055 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NR1H2P55055 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.53■□□□□ 0.24
NR1H2P55055 CYP2T1P-202ENST00000641596 2535 ntBASIC16.53■□□□□ 0.24
NR1H2P55055 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NR1H2P55055 KRT8P11-201ENST00000409686 1436 ntBASIC16.53■□□□□ 0.24
NR1H2P55055 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR1H2P55055 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NR1H2P55055 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H2P55055 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.52■□□□□ 0.24
NR1H2P55055 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.52■□□□□ 0.24
NR1H2P55055 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H2P55055 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
NR1H2P55055 AL513523.2-202ENST00000427283 2040 ntBASIC16.52■□□□□ 0.24
NR1H2P55055 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.52■□□□□ 0.24
NR1H2P55055 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H2P55055 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H2P55055 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H2P55055 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H2P55055 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.52■□□□□ 0.24
NR1H2P55055 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NR1H2P55055 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.52■□□□□ 0.24
NR1H2P55055 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.52■□□□□ 0.24
NR1H2P55055 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.52■□□□□ 0.24
NR1H2P55055 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.52■□□□□ 0.24
NR1H2P55055 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.52■□□□□ 0.24
NR1H2P55055 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.52■□□□□ 0.24
NR1H2P55055 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NR1H2P55055 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.52■□□□□ 0.23
NR1H2P55055 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.52■□□□□ 0.23
NR1H2P55055 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
NR1H2P55055 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NR1H2P55055 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.52■□□□□ 0.23
NR1H2P55055 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NR1H2P55055 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NR1H2P55055 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H2P55055 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H2P55055 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms