Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC3P51654 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
GPC3P51654 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC3P51654 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GPC3P51654 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC3P51654 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC3P51654 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC3P51654 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC3P51654 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC3P51654 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.18■□□□□ 0.66
GPC3P51654 AC007967.2-201ENST00000432613 625 ntBASIC19.18■□□□□ 0.66
GPC3P51654 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.18■□□□□ 0.66
GPC3P51654 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC3P51654 AC092865.5-201ENST00000545435 363 ntBASIC19.18■□□□□ 0.66
GPC3P51654 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC3P51654 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.18■□□□□ 0.66
GPC3P51654 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.18■□□□□ 0.66
GPC3P51654 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GPC3P51654 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GPC3P51654 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC3P51654 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.18■□□□□ 0.66
GPC3P51654 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC3P51654 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC3P51654 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC3P51654 LINC00304-203ENST00000565008 1864 ntBASIC19.18■□□□□ 0.66
GPC3P51654 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC3P51654 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
GPC3P51654 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GPC3P51654 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.17■□□□□ 0.66
GPC3P51654 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC3P51654 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GPC3P51654 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
GPC3P51654 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 BX842568.4-201ENST00000421222 227 ntBASIC19.17■□□□□ 0.66
GPC3P51654 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.17■□□□□ 0.66
GPC3P51654 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.17■□□□□ 0.66
GPC3P51654 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC3P51654 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.17■□□□□ 0.66
GPC3P51654 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.17■□□□□ 0.66
GPC3P51654 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GPC3P51654 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GPC3P51654 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GPC3P51654 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 AC133963.1-201ENST00000504166 1679 ntBASIC19.17■□□□□ 0.66
GPC3P51654 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC3P51654 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
GPC3P51654 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC3P51654 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC3P51654 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
GPC3P51654 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
GPC3P51654 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
GPC3P51654 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.16■□□□□ 0.66
GPC3P51654 LINC00982-205ENST00000420957 435 ntBASIC19.16■□□□□ 0.66
GPC3P51654 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC3P51654 RPS15P9-201ENST00000494093 319 ntBASIC19.16■□□□□ 0.66
GPC3P51654 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC3P51654 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC3P51654 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC3P51654 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.16■□□□□ 0.66
GPC3P51654 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.16■□□□□ 0.66
GPC3P51654 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.16■□□□□ 0.66
GPC3P51654 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.16■□□□□ 0.66
GPC3P51654 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC3P51654 AL353135.1-201ENST00000606729 504 ntBASIC19.16■□□□□ 0.66
GPC3P51654 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC3P51654 LETM1P2-201ENST00000597330 2178 ntBASIC19.16■□□□□ 0.66
GPC3P51654 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
GPC3P51654 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC3P51654 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.16■□□□□ 0.66
GPC3P51654 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
GPC3P51654 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GPC3P51654 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GPC3P51654 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC3P51654 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.15■□□□□ 0.66
GPC3P51654 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC3P51654 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC3P51654 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.15■□□□□ 0.66
GPC3P51654 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GPC3P51654 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC3P51654 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms