Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2AP49459 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2AP49459 AC132938.6-201ENST00000623828 1655 ntBASIC11.08□□□□□ -0.64
UBE2AP49459 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
UBE2AP49459 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2AP49459 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2AP49459 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
UBE2AP49459 RNF152P1-201ENST00000397754 604 ntBASIC11.07□□□□□ -0.64
UBE2AP49459 STARP1-201ENST00000397973 869 ntBASIC11.07□□□□□ -0.64
UBE2AP49459 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2AP49459 AK4P3-201ENST00000418260 669 ntBASIC11.07□□□□□ -0.64
UBE2AP49459 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.07□□□□□ -0.64
UBE2AP49459 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 AC011558.1-201ENST00000623459 338 ntBASIC11.07□□□□□ -0.64
UBE2AP49459 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2AP49459 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
UBE2AP49459 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 SIRPAP1-201ENST00000448467 1770 ntBASIC11.07□□□□□ -0.64
UBE2AP49459 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2AP49459 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
UBE2AP49459 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
UBE2AP49459 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.07□□□□□ -0.64
UBE2AP49459 CEP83-AS1-201ENST00000623122 2482 ntBASIC11.07□□□□□ -0.64
UBE2AP49459 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
UBE2AP49459 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2AP49459 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
UBE2AP49459 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2AP49459 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
UBE2AP49459 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2AP49459 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.06□□□□□ -0.64
UBE2AP49459 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
UBE2AP49459 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
UBE2AP49459 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 LINC00167-201ENST00000530583 1419 ntBASIC11.06□□□□□ -0.64
UBE2AP49459 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
UBE2AP49459 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms