Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
GABRA4P48169 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GABRA4P48169 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GABRA4P48169 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GABRA4P48169 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.43■□□□□ 0.22
GABRA4P48169 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.43■□□□□ 0.22
GABRA4P48169 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GABRA4P48169 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GABRA4P48169 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.43■□□□□ 0.22
GABRA4P48169 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GABRA4P48169 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GABRA4P48169 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.43■□□□□ 0.22
GABRA4P48169 SLC25A1P3-201ENST00000395415 828 ntBASIC16.43■□□□□ 0.22
GABRA4P48169 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GABRA4P48169 VN2R19P-201ENST00000442399 1052 ntBASIC16.43■□□□□ 0.22
GABRA4P48169 HCG4B-203ENST00000450128 991 ntBASIC16.43■□□□□ 0.22
GABRA4P48169 PAWRP1-201ENST00000451083 565 ntBASIC16.43■□□□□ 0.22
GABRA4P48169 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.43■□□□□ 0.22
GABRA4P48169 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
GABRA4P48169 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.43■□□□□ 0.22
GABRA4P48169 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.43■□□□□ 0.22
GABRA4P48169 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.43■□□□□ 0.22
GABRA4P48169 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.43■□□□□ 0.22
GABRA4P48169 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.43■□□□□ 0.22
GABRA4P48169 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
GABRA4P48169 GGTLC5P-201ENST00000617623 998 ntBASIC16.43■□□□□ 0.22
GABRA4P48169 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GABRA4P48169 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.43■□□□□ 0.22
GABRA4P48169 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GABRA4P48169 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GABRA4P48169 AL138688.1-201ENST00000624851 1594 ntBASIC16.43■□□□□ 0.22
GABRA4P48169 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GABRA4P48169 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
GABRA4P48169 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GABRA4P48169 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GABRA4P48169 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 IGLL3P-201ENST00000412472 434 ntBASIC16.42■□□□□ 0.22
GABRA4P48169 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.42■□□□□ 0.22
GABRA4P48169 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.42■□□□□ 0.22
GABRA4P48169 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.42■□□□□ 0.22
GABRA4P48169 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.42■□□□□ 0.22
GABRA4P48169 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GABRA4P48169 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.42■□□□□ 0.22
GABRA4P48169 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.41■□□□□ 0.22
GABRA4P48169 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.41■□□□□ 0.22
GABRA4P48169 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 MRPL20P1-201ENST00000400819 433 ntBASIC16.41■□□□□ 0.22
GABRA4P48169 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.41■□□□□ 0.22
GABRA4P48169 CRYGEP-201ENST00000412192 528 ntBASIC16.41■□□□□ 0.22
GABRA4P48169 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.41■□□□□ 0.22
GABRA4P48169 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.41■□□□□ 0.22
GABRA4P48169 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GABRA4P48169 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.41■□□□□ 0.22
GABRA4P48169 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.4■□□□□ 0.22
GABRA4P48169 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.4■□□□□ 0.22
GABRA4P48169 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
GABRA4P48169 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms