Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN1AP38936 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKN1AP38936 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
CDKN1AP38936 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDKN1AP38936 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDKN1AP38936 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDKN1AP38936 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDKN1AP38936 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.83□□□□□ -0.03
CDKN1AP38936 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
CDKN1AP38936 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDKN1AP38936 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CDKN1AP38936 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CDKN1AP38936 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CDKN1AP38936 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKN1AP38936 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKN1AP38936 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKN1AP38936 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDKN1AP38936 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDKN1AP38936 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKN1AP38936 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CDKN1AP38936 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKN1AP38936 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKN1AP38936 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKN1AP38936 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKN1AP38936 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
CDKN1AP38936 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKN1AP38936 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.83□□□□□ -0.04
CDKN1AP38936 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKN1AP38936 ALG1L5P-201ENST00000482043 771 ntBASIC14.83□□□□□ -0.04
CDKN1AP38936 IGHV3-52-201ENST00000519770 353 ntBASIC14.83□□□□□ -0.04
CDKN1AP38936 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKN1AP38936 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKN1AP38936 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
CDKN1AP38936 AC092865.6-201ENST00000642101 219 ntBASIC14.83□□□□□ -0.04
CDKN1AP38936 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKN1AP38936 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKN1AP38936 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDKN1AP38936 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKN1AP38936 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKN1AP38936 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKN1AP38936 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDKN1AP38936 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKN1AP38936 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKN1AP38936 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKN1AP38936 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKN1AP38936 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 TNRC18P3-201ENST00000441896 2691 ntBASIC14.82□□□□□ -0.04
CDKN1AP38936 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 AC097637.2-201ENST00000624096 1997 ntBASIC14.82□□□□□ -0.04
CDKN1AP38936 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKN1AP38936 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKN1AP38936 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDKN1AP38936 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKN1AP38936 VN2R19P-201ENST00000442399 1052 ntBASIC14.82□□□□□ -0.04
CDKN1AP38936 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKN1AP38936 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKN1AP38936 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKN1AP38936 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.82□□□□□ -0.04
CDKN1AP38936 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.82□□□□□ -0.04
CDKN1AP38936 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
CDKN1AP38936 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.82□□□□□ -0.04
CDKN1AP38936 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDKN1AP38936 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKN1AP38936 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDKN1AP38936 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKN1AP38936 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKN1AP38936 AC068880.1-201ENST00000507289 2297 ntBASIC14.82□□□□□ -0.04
CDKN1AP38936 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.82□□□□□ -0.04
CDKN1AP38936 AC002310.6-201ENST00000624451 1377 ntBASIC14.82□□□□□ -0.04
CDKN1AP38936 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CDKN1AP38936 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDKN1AP38936 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKN1AP38936 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDKN1AP38936 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDKN1AP38936 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN1AP38936 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN1AP38936 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN1AP38936 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN1AP38936 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN1AP38936 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKN1AP38936 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms